Dca50119.1
Annotation
- 2-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- sp|Q0ZCD0_POPTR#Integrase#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0006278#3F1P0C
- Repeat List (scaffold6338)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca50119.1 |
2 |
544 |
892 |
31.61 |
543 |
51 |
4e-129
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
242 |
753 |
1717 |
29.81 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca50119.1 |
539 |
798 |
892 |
10.31 |
260 |
36 |
5e-40
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0202300-03 |
176 |
431 |
591 |
43.31 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold6338 |
Augustus |
mRNA |
10881 |
14488 |
. |
+ |
. |
ID=Dca50119.1;Parent=Dca50119 |
| scaffold6338 |
Augustus |
exon |
10881 |
12499 |
. |
+ |
. |
ID=Dca50119.1.exon1;Parent=Dca50119.1 |
| scaffold6338 |
Augustus |
exon |
13429 |
14488 |
. |
+ |
. |
ID=Dca50119.1.exon2;Parent=Dca50119.1 |
