Carnation DB

Dca50168.1

Annotation

8-exons
f-1
sp|E0CPU3_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_18s0001g10390#unknown#0F0P0C
AT3G49180.1 | Symbols: RID3 | Transducin/WD40 repeat-like superfamily protein | chr3:18229810-18231874 FORWARD LENGTH=438
Repeat List (scaffold6343)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca50168.1	2	429	435	58.16	428	58	5e-148
Target_name	Start	End	Length	Cov(%)
sp\|E0CPU3_VITVI	5	440	448	97.32

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca50168.1	1	426	435	49.19	426	49	3e-118
Target_name	Start	End	Length	Cov(%)
AT3G49180.1	1	431	438	98.4

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold6343	Augustus	mRNA	3938	11114	.	+	.	ID=Dca50168.1;Parent=Dca50168
scaffold6343	Augustus	exon	3938	4129	.	+	.	ID=Dca50168.1.exon1;Parent=Dca50168.1
scaffold6343	Augustus	exon	4659	4772	.	+	.	ID=Dca50168.1.exon2;Parent=Dca50168.1
scaffold6343	Augustus	exon	4885	5018	.	+	.	ID=Dca50168.1.exon3;Parent=Dca50168.1
scaffold6343	Augustus	exon	5123	5270	.	+	.	ID=Dca50168.1.exon4;Parent=Dca50168.1
scaffold6343	Augustus	exon	7053	7252	.	+	.	ID=Dca50168.1.exon5;Parent=Dca50168.1
scaffold6343	Augustus	exon	8517	8644	.	+	.	ID=Dca50168.1.exon6;Parent=Dca50168.1
scaffold6343	Augustus	exon	9190	9422	.	+	.	ID=Dca50168.1.exon7;Parent=Dca50168.1
scaffold6343	Augustus	exon	10956	11114	.	+	.	ID=Dca50168.1.exon8;Parent=Dca50168.1