Dca50210.1
Annotation
- 4-exons
- f-1
- sp|Q2QUJ4_ORYSJ#Retrotransposon protein, putative, Ty1-copia subclass#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os12g16060#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold6350)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca50210.1 |
1 |
93 |
398 |
14.82 |
93 |
54 |
1e-22
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q2QUJ4_ORYSJ |
792 |
902 |
1050 |
10.57 |
AtOs (Arabidopsis thaliana & Oryza sativa)
No data
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold6350 |
Augustus |
mRNA |
15261 |
18419 |
. |
- |
. |
ID=Dca50210.1;Parent=Dca50210 |
| scaffold6350 |
Augustus |
exon |
15261 |
15601 |
. |
- |
. |
ID=Dca50210.1.exon1;Parent=Dca50210.1 |
| scaffold6350 |
Augustus |
exon |
15672 |
16056 |
. |
- |
. |
ID=Dca50210.1.exon2;Parent=Dca50210.1 |
| scaffold6350 |
Augustus |
exon |
16370 |
16632 |
. |
- |
. |
ID=Dca50210.1.exon3;Parent=Dca50210.1 |
| scaffold6350 |
Augustus |
exon |
18212 |
18419 |
. |
- |
. |
ID=Dca50210.1.exon4;Parent=Dca50210.1 |
