Dca50266.1
Annotation
- 2-exons
- f-160
- sp|Q9ZPU4_ARATH#Putative retroelement pol polyprotein#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g13940#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold637)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca50266.1 |
2 |
280 |
327 |
31.49 |
279 |
34 |
1e-49
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9ZPU4_ARATH |
19 |
317 |
1501 |
19.92 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca50266.1 |
35 |
221 |
327 |
19.87 |
187 |
35 |
5e-30
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G21280.1 |
38 |
225 |
237 |
79.32 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold637 |
PASA |
mRNA |
85789 |
87502 |
. |
- |
. |
ID=Dca50266.1;Parent=Dca50266 |
| scaffold637 |
PASA |
exon |
85789 |
86101 |
. |
- |
. |
ID=Dca50266.1.exon1;Parent=Dca50266.1 |
| scaffold637 |
PASA |
exon |
86389 |
87502 |
. |
- |
. |
ID=Dca50266.1.exon2;Parent=Dca50266.1 |
