Carnation DB

Dca50397.1

Annotation

8-exons
f-1
sp|D7LWN7_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_487116#GO:0005667;GO:0003677;GO:0003700;GO:0006351#2F1P1C
AT5G03415.1 | Symbols: DPB, ATDPB | Transcription factor DP | chr5:842842-845200 FORWARD LENGTH=385
Repeat List (scaffold64)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca50397.1	19	270	340	55.58	252	70	3e-101
Target_name	Start	End	Length	Cov(%)
sp\|D7LWN7_ARALL	29	300	389	69.92

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca50397.1	19	270	340	54.11	252	68	4e-99
Target_name	Start	End	Length	Cov(%)
AT5G03415.1	25	296	385	70.64

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold64	Augustus	mRNA	461402	464071	.	-	.	ID=Dca50397.1;Parent=Dca50397
scaffold64	Augustus	exon	461402	461678	.	-	.	ID=Dca50397.1.exon1;Parent=Dca50397.1
scaffold64	Augustus	exon	461815	461885	.	-	.	ID=Dca50397.1.exon2;Parent=Dca50397.1
scaffold64	Augustus	exon	462360	462458	.	-	.	ID=Dca50397.1.exon3;Parent=Dca50397.1
scaffold64	Augustus	exon	462574	462642	.	-	.	ID=Dca50397.1.exon4;Parent=Dca50397.1
scaffold64	Augustus	exon	462722	462865	.	-	.	ID=Dca50397.1.exon5;Parent=Dca50397.1
scaffold64	Augustus	exon	462962	463017	.	-	.	ID=Dca50397.1.exon6;Parent=Dca50397.1
scaffold64	Augustus	exon	463552	463631	.	-	.	ID=Dca50397.1.exon7;Parent=Dca50397.1
scaffold64	Augustus	exon	463845	464071	.	-	.	ID=Dca50397.1.exon8;Parent=Dca50397.1