Carnation DB

Dca5044.1

Annotation

5-exons
f-205
sp|B9N189_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_597628#unknown#0F0P0C
AT2G25010.1 | Symbols: | Aminotransferase-like, plant mobile domain family protein | chr2:10631691-10633547 FORWARD LENGTH=509
Repeat List (scaffold11922)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5044.1	283	455	566	11.83	173	37	6e-22
Target_name	Start	End	Length	Cov(%)
sp\|B9N189_POPTR	198	379	511	35.61

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5044.1	283	546	566	16.07	264	31	1e-21
Target_name	Start	End	Length	Cov(%)
AT2G25010.1	177	460	509	55.79

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold11922	Augustus	mRNA	448	3691	.	+	.	ID=Dca5044.1;Parent=Dca5044
scaffold11922	Augustus	exon	448	548	.	+	.	ID=Dca5044.1.exon1;Parent=Dca5044.1
scaffold11922	Augustus	exon	915	1017	.	+	.	ID=Dca5044.1.exon2;Parent=Dca5044.1
scaffold11922	Augustus	exon	1707	2361	.	+	.	ID=Dca5044.1.exon3;Parent=Dca5044.1
scaffold11922	Augustus	exon	2542	3305	.	+	.	ID=Dca5044.1.exon4;Parent=Dca5044.1
scaffold11922	Augustus	exon	3410	3691	.	+	.	ID=Dca5044.1.exon5;Parent=Dca5044.1