Dca50449.1
Annotation
- 3-exons
- f-1018
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- sp|Q0ZCB7_POPTR#Integrase#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#unknown#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold6405)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca50449.1 |
129 |
332 |
332 |
38.85 |
204 |
64 |
4e-71
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
1135 |
1336 |
1717 |
11.76 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca50449.1 |
120 |
301 |
332 |
20.78 |
182 |
38 |
2e-22
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
819 |
995 |
1539 |
11.5 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold6405 |
Augustus |
mRNA |
12045 |
16427 |
. |
- |
. |
ID=Dca50449.1;Parent=Dca50449 |
| scaffold6405 |
Augustus |
exon |
12045 |
13188 |
. |
- |
. |
ID=Dca50449.1.exon1;Parent=Dca50449.1 |
| scaffold6405 |
Augustus |
exon |
13340 |
13951 |
. |
- |
. |
ID=Dca50449.1.exon2;Parent=Dca50449.1 |
| scaffold6405 |
Augustus |
exon |
16042 |
16427 |
. |
- |
. |
ID=Dca50449.1.exon3;Parent=Dca50449.1 |
