Carnation DB

Dca505.1

Annotation

6-exons
f-1
sp|B9HHB4_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_562926#GO:0003676#1F0P0C
sp|B9SFZ8_RICCO#Exonuclease, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1153050#GO:0005622;GO:0004527;GO:0003676#2F0P1C
Repeat List (scaffold10099)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca505.1	2	303	309	51.13	302	50	1e-75
Target_name	Start	End	Length	Cov(%)
sp\|B9HHB4_POPTR	133	449	463	68.46

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca505.1	1	230	309	36.24	230	39	8e-47
Target_name	Start	End	Length	Cov(%)
AT3G50100.1	121	406	409	69.92

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold10099	Augustus	mRNA	728	3195	.	+	.	ID=Dca505.1;Parent=Dca505
scaffold10099	Augustus	exon	728	868	.	+	.	ID=Dca505.1.exon1;Parent=Dca505.1
scaffold10099	Augustus	exon	976	1092	.	+	.	ID=Dca505.1.exon2;Parent=Dca505.1
scaffold10099	Augustus	exon	1927	2061	.	+	.	ID=Dca505.1.exon3;Parent=Dca505.1
scaffold10099	Augustus	exon	2139	2246	.	+	.	ID=Dca505.1.exon4;Parent=Dca505.1
scaffold10099	Augustus	exon	2438	2542	.	+	.	ID=Dca505.1.exon5;Parent=Dca505.1
scaffold10099	Augustus	exon	2872	3195	.	+	.	ID=Dca505.1.exon6;Parent=Dca505.1