Dca50510.1
Annotation
- 2-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold642)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca50510.1 |
34 |
179 |
195 |
34.35 |
146 |
44 |
6e-28
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
7 |
160 |
1501 |
10.25 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca50510.1 |
55 |
165 |
195 |
17.43 |
111 |
31 |
1e-07
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0315200-01 |
80 |
190 |
296 |
37.5 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold642 |
Augustus |
mRNA |
137095 |
139964 |
. |
+ |
. |
ID=Dca50510.1;Parent=Dca50510 |
| scaffold642 |
Augustus |
exon |
137095 |
137142 |
. |
+ |
. |
ID=Dca50510.1.exon1;Parent=Dca50510.1 |
| scaffold642 |
Augustus |
exon |
139425 |
139964 |
. |
+ |
. |
ID=Dca50510.1.exon2;Parent=Dca50510.1 |
