Dca5052.1
Annotation
- 2-exons
- f-1
- sp|Q9SJP0_ARATH#Putative retroelement pol polyprotein#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g15410#GO:0004523;GO:0003723;GO:0003964;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold1193)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5052.1 |
3 |
317 |
696 |
27.58 |
315 |
61 |
1e-118
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9SJP0_ARATH |
718 |
1032 |
1787 |
17.62 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5052.1 |
57 |
312 |
696 |
11.06 |
256 |
31 |
4e-38
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
580 |
830 |
1539 |
16.3 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1193 |
Augustus |
mRNA |
1 |
4372 |
. |
- |
. |
ID=Dca5052.1;Parent=Dca5052 |
| scaffold1193 |
Augustus |
exon |
1 |
1137 |
. |
- |
. |
ID=Dca5052.1.exon1;Parent=Dca5052.1 |
| scaffold1193 |
Augustus |
exon |
3420 |
4372 |
. |
- |
. |
ID=Dca5052.1.exon2;Parent=Dca5052.1 |
