Dca50545.1
Annotation
- 2-exons
- f-1
- sp|Q9SJP3_ARATH#Putative non-LTR retroelement reverse transcriptase#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g15380#GO:0004523;GO:0003723;GO:0003964;GO:0006278#3F1P0C
- Repeat List (scaffold643)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca50545.1 |
89 |
207 |
210 |
20.95 |
119 |
37 |
2e-12
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9SJP3_ARATH |
1185 |
1303 |
1311 |
9.07 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca50545.1 |
83 |
204 |
210 |
20.95 |
122 |
35 |
5e-08
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G09490.1 |
28 |
152 |
170 |
73.52 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold643 |
Augustus |
mRNA |
68151 |
70389 |
. |
- |
. |
ID=Dca50545.1;Parent=Dca50545 |
| scaffold643 |
Augustus |
exon |
68151 |
68557 |
. |
- |
. |
ID=Dca50545.1.exon1;Parent=Dca50545.1 |
| scaffold643 |
Augustus |
exon |
70164 |
70389 |
. |
- |
. |
ID=Dca50545.1.exon2;Parent=Dca50545.1 |
