Carnation DB

Dca50547.1

Annotation

6-exons
f-1
sp|B9HTJ9_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_227541#GO:0016881;GO:0005524#2F0P0C
sp|B9SR14_RICCO#Ubiquitin-conjugating enzyme E2 G, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0464270#GO:0005524;GO:0004842#2F0P0C
Repeat List (scaffold643)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca50547.1	5	168	168	87.5	164	90	4e-86
Target_name	Start	End	Length	Cov(%)
sp\|B9HTJ9_POPTR	1	164	164	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca50547.1	5	168	168	89.28	164	92	2e-81
Target_name	Start	End	Length	Cov(%)
AT5G59300.1	40	203	203	80.78

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold643	Augustus	mRNA	87637	90500	.	+	.	ID=Dca50547.1;Parent=Dca50547
scaffold643	Augustus	exon	87637	87685	.	+	.	ID=Dca50547.1.exon1;Parent=Dca50547.1
scaffold643	Augustus	exon	87833	87935	.	+	.	ID=Dca50547.1.exon2;Parent=Dca50547.1
scaffold643	Augustus	exon	88670	88767	.	+	.	ID=Dca50547.1.exon3;Parent=Dca50547.1
scaffold643	Augustus	exon	88859	88959	.	+	.	ID=Dca50547.1.exon4;Parent=Dca50547.1
scaffold643	Augustus	exon	89717	89794	.	+	.	ID=Dca50547.1.exon5;Parent=Dca50547.1
scaffold643	Augustus	exon	90423	90500	.	+	.	ID=Dca50547.1.exon6;Parent=Dca50547.1