Carnation DB

Dca50574.1

Annotation

5-exons
f-1
sp|D7TAK2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_01s0010g02230#GO:0003677;GO:0000156;GO:0006355#2F1P0C
sp|B9RMP7_RICCO#Two-component sensor histidine kinase bacteria, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1082510#GO:0003677;GO:0016301;GO:0000156;GO:0006355#3F1P0C
Repeat List (scaffold644)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca50574.1	3	568	568	53.69	566	49	4e-132
Target_name	Start	End	Length	Cov(%)
sp\|D7TAK2_VITVI	1	594	594	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca50574.1	4	511	568	45.59	508	49	7e-103
Target_name	Start	End	Length	Cov(%)
AT1G67710.1	3	468	521	89.44

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold644	Augustus	mRNA	53367	56478	.	+	.	ID=Dca50574.1;Parent=Dca50574
scaffold644	Augustus	exon	53367	53502	.	+	.	ID=Dca50574.1.exon1;Parent=Dca50574.1
scaffold644	Augustus	exon	54612	54764	.	+	.	ID=Dca50574.1.exon2;Parent=Dca50574.1
scaffold644	Augustus	exon	54874	55221	.	+	.	ID=Dca50574.1.exon3;Parent=Dca50574.1
scaffold644	Augustus	exon	55312	55388	.	+	.	ID=Dca50574.1.exon4;Parent=Dca50574.1
scaffold644	Augustus	exon	55486	56478	.	+	.	ID=Dca50574.1.exon5;Parent=Dca50574.1