Carnation DB

Dca50722.1

Annotation

8-exons
f-1
sp|E0CU18_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_12s0028g00830#unknown#0F0P0C
Os03t0666200-01 Pleckstrin homology-type domain containing protein.
Repeat List (scaffold648)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca50722.1	66	484	492	59.14	419	70	4e-160
Target_name	Start	End	Length	Cov(%)
sp\|E0CU18_VITVI	65	483	500	83.8

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca50722.1	66	484	492	54.06	419	63	3e-134
Target_name	Start	End	Length	Cov(%)
Os03t0666200-01	65	485	501	84.03

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold648	Augus-PASA	mRNA	64960	74250	.	-	.	ID=Dca50722.1;Parent=Dca50722
scaffold648	Augus-PASA	exon	64960	65296	.	-	.	ID=Dca50722.1.exon1;Parent=Dca50722.1
scaffold648	Augus-PASA	exon	66338	66630	.	-	.	ID=Dca50722.1.exon2;Parent=Dca50722.1
scaffold648	Augus-PASA	exon	66806	67033	.	-	.	ID=Dca50722.1.exon3;Parent=Dca50722.1
scaffold648	Augus-PASA	exon	67640	67868	.	-	.	ID=Dca50722.1.exon4;Parent=Dca50722.1
scaffold648	Augus-PASA	exon	68427	68508	.	-	.	ID=Dca50722.1.exon5;Parent=Dca50722.1
scaffold648	Augus-PASA	exon	68642	68673	.	-	.	ID=Dca50722.1.exon6;Parent=Dca50722.1
scaffold648	Augustus	exon	68766	68849	.	-	.	ID=Dca50722.1.exon7;Parent=Dca50722.1
scaffold648	Augustus	exon	74057	74250	.	-	.	ID=Dca50722.1.exon8;Parent=Dca50722.1