Carnation DB

Dca5089.1

Annotation

8-exons
f-1
sp|D8SQN3_SELML#DNA-directed RNA polymerase#Selaginella moellendorffii (Spikemoss)#ORFNames=SELMODRAFT_446351#GO:0005634;GO:0003677;GO:0003899;GO:0032549;GO:0008270#4F0P1C
Repeat List (scaffold11947)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5089.1	1	367	369	58.26	367	58	1e-116
Target_name	Start	End	Length	Cov(%)
sp\|D8SQN3_SELML	1025	1391	1393	26.34

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5089.1	1	369	369	56.36	369	57	9e-115
Target_name	Start	End	Length	Cov(%)
Os04t0492300-01	1014	1383	1384	26.73

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold11947	Augustus	mRNA	580	3294	.	+	.	ID=Dca5089.1;Parent=Dca5089
scaffold11947	Augustus	exon	580	727	.	+	.	ID=Dca5089.1.exon1;Parent=Dca5089.1
scaffold11947	Augustus	exon	842	993	.	+	.	ID=Dca5089.1.exon2;Parent=Dca5089.1
scaffold11947	Augustus	exon	1333	1491	.	+	.	ID=Dca5089.1.exon3;Parent=Dca5089.1
scaffold11947	Augustus	exon	1577	1690	.	+	.	ID=Dca5089.1.exon4;Parent=Dca5089.1
scaffold11947	Augustus	exon	1812	1888	.	+	.	ID=Dca5089.1.exon5;Parent=Dca5089.1
scaffold11947	Augustus	exon	2392	2596	.	+	.	ID=Dca5089.1.exon6;Parent=Dca5089.1
scaffold11947	Augustus	exon	2698	2900	.	+	.	ID=Dca5089.1.exon7;Parent=Dca5089.1
scaffold11947	Augustus	exon	3243	3294	.	+	.	ID=Dca5089.1.exon8;Parent=Dca5089.1