Carnation DB

Dca50890.1

Annotation

10-exons
f-1
sp|B9N3R0_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_744076#unknown#0F0P0C
AT4G22540.1 | Symbols: ORP2A | OSBP(oxysterol binding protein)-related protein 2A | chr4:11860969-11866108 REVERSE LENGTH=721
Repeat List (scaffold6518)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca50890.1	1	750	750	64.66	750	63	0
Target_name	Start	End	Length	Cov(%)
sp\|B9N3R0_POPTR	6	736	737	99.18

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca50890.1	1	744	750	61.86	744	62	0
Target_name	Start	End	Length	Cov(%)
AT4G22540.1	6	717	721	98.75

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold6518	Augustus	mRNA	6416	13051	.	-	.	ID=Dca50890.1;Parent=Dca50890
scaffold6518	Augustus	exon	6416	6592	.	-	.	ID=Dca50890.1.exon1;Parent=Dca50890.1
scaffold6518	Augustus	exon	6844	6957	.	-	.	ID=Dca50890.1.exon2;Parent=Dca50890.1
scaffold6518	Augustus	exon	7041	7274	.	-	.	ID=Dca50890.1.exon3;Parent=Dca50890.1
scaffold6518	Augustus	exon	7399	7539	.	-	.	ID=Dca50890.1.exon4;Parent=Dca50890.1
scaffold6518	Augustus	exon	7636	7803	.	-	.	ID=Dca50890.1.exon5;Parent=Dca50890.1
scaffold6518	Augustus	exon	7895	8050	.	-	.	ID=Dca50890.1.exon6;Parent=Dca50890.1
scaffold6518	Augustus	exon	8178	8614	.	-	.	ID=Dca50890.1.exon7;Parent=Dca50890.1
scaffold6518	Augustus	exon	8923	9001	.	-	.	ID=Dca50890.1.exon8;Parent=Dca50890.1
scaffold6518	Augustus	exon	9110	9469	.	-	.	ID=Dca50890.1.exon9;Parent=Dca50890.1
scaffold6518	Augustus	exon	12665	13051	.	-	.	ID=Dca50890.1.exon10;Parent=Dca50890.1