Carnation DB

Dca50896.1

Annotation

9-exons
f-1
sp|D7SYT7_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_02s0236g00130#GO:0005524;GO:0004674#2F0P0C
sp|B9RUQ6_RICCO#Serine/threonine-protein kinase SAPK3, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0855720#GO:0005524;GO:0004674#2F0P0C
Repeat List (scaffold652)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca50896.1	1	329	329	77.81	329	76	1e-150
Target_name	Start	End	Length	Cov(%)
sp\|D7SYT7_VITVI	1	337	340	99.11

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca50896.1	1	327	329	72.94	327	72	1e-142
Target_name	Start	End	Length	Cov(%)
Os10t0564500-01	1	329	335	98.2

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold652	Augus-PASA	mRNA	60653	63705	.	-	.	ID=Dca50896.1;Parent=Dca50896
scaffold652	Augus-PASA	exon	60653	60919	.	-	.	ID=Dca50896.1.exon1;Parent=Dca50896.1
scaffold652	Augus-PASA	exon	61241	61339	.	-	.	ID=Dca50896.1.exon2;Parent=Dca50896.1
scaffold652	Augus-PASA	exon	61422	61526	.	-	.	ID=Dca50896.1.exon3;Parent=Dca50896.1
scaffold652	Augustus	exon	61627	61698	.	-	.	ID=Dca50896.1.exon4;Parent=Dca50896.1
scaffold652	Augus-PASA	exon	61802	61894	.	-	.	ID=Dca50896.1.exon5;Parent=Dca50896.1
scaffold652	Augus-PASA	exon	61976	62029	.	-	.	ID=Dca50896.1.exon6;Parent=Dca50896.1
scaffold652	Augus-PASA	exon	62132	62233	.	-	.	ID=Dca50896.1.exon7;Parent=Dca50896.1
scaffold652	Augus-PASA	exon	63013	63087	.	-	.	ID=Dca50896.1.exon8;Parent=Dca50896.1
scaffold652	Augus-PASA	exon	63583	63705	.	-	.	ID=Dca50896.1.exon9;Parent=Dca50896.1