Dca5092.1
Annotation
- 3-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- sp|Q2AA50_ASPOF#Retrotransposon gag protein#Asparagus officinalis (Garden asparagus)#ORFNames=19.t00014#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold1195)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5092.1 |
1 |
611 |
748 |
41.44 |
611 |
51 |
2e-152
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
162 |
750 |
1717 |
34.3 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5092.1 |
363 |
455 |
748 |
4.67 |
93 |
38 |
4e-12
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0292200-01 |
98 |
189 |
192 |
47.91 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1195 |
Augustus |
mRNA |
11882 |
14333 |
. |
- |
. |
ID=Dca5092.1;Parent=Dca5092 |
| scaffold1195 |
Augustus |
exon |
11882 |
12101 |
. |
- |
. |
ID=Dca5092.1.exon1;Parent=Dca5092.1 |
| scaffold1195 |
Augustus |
exon |
12218 |
13340 |
. |
- |
. |
ID=Dca5092.1.exon2;Parent=Dca5092.1 |
| scaffold1195 |
Augustus |
exon |
13430 |
14333 |
. |
- |
. |
ID=Dca5092.1.exon3;Parent=Dca5092.1 |
