Carnation DB

Dca50932.1

Annotation

8-exons
f-1
sp|F6I0C5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_04s0044g01700#unknown#0F0P0C
sp|B9SEL3_RICCO#Transcription initiation factor ia, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0970060#GO:0003743#1F0P0C
Repeat List (scaffold653)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca50932.1	19	161	189	41.26	143	46	4e-35
Target_name	Start	End	Length	Cov(%)
sp\|F6I0C5_VITVI	260	426	627	26.63

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca50932.1	23	161	189	37.56	139	43	1e-30
Target_name	Start	End	Length	Cov(%)
AT1G30590.1	255	417	604	26.98

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold653	Augustus	mRNA	89171	92324	.	-	.	ID=Dca50932.1;Parent=Dca50932
scaffold653	Augustus	exon	89171	89257	.	-	.	ID=Dca50932.1.exon1;Parent=Dca50932.1
scaffold653	Augustus	exon	89538	89625	.	-	.	ID=Dca50932.1.exon2;Parent=Dca50932.1
scaffold653	Augustus	exon	89714	89797	.	-	.	ID=Dca50932.1.exon3;Parent=Dca50932.1
scaffold653	Augustus	exon	90797	90822	.	-	.	ID=Dca50932.1.exon4;Parent=Dca50932.1
scaffold653	Augustus	exon	91298	91366	.	-	.	ID=Dca50932.1.exon5;Parent=Dca50932.1
scaffold653	Augustus	exon	91460	91594	.	-	.	ID=Dca50932.1.exon6;Parent=Dca50932.1
scaffold653	Augustus	exon	91701	91749	.	-	.	ID=Dca50932.1.exon7;Parent=Dca50932.1
scaffold653	Augustus	exon	92293	92324	.	-	.	ID=Dca50932.1.exon8;Parent=Dca50932.1