Carnation DB

Dca50942.1

Annotation

6-exons
f-1
sp|B9HZJ0_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_805764#GO:0016787#1F0P0C
AT4G22300.1 | Symbols: SOBER1 | carboxylesterases | chr4:11787560-11789252 REVERSE LENGTH=262
Repeat List (scaffold6533)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca50942.1	1	216	216	76.85	216	77	1e-97
Target_name	Start	End	Length	Cov(%)
sp\|B9HZJ0_POPTR	49	264	264	81.81

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca50942.1	4	212	216	72.22	209	75	1e-96
Target_name	Start	End	Length	Cov(%)
AT4G22300.1	47	255	262	79.77

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold6533	Augustus	mRNA	10959	13033	.	-	.	ID=Dca50942.1;Parent=Dca50942
scaffold6533	Augustus	exon	10959	11048	.	-	.	ID=Dca50942.1.exon1;Parent=Dca50942.1
scaffold6533	Augustus	exon	11141	11248	.	-	.	ID=Dca50942.1.exon2;Parent=Dca50942.1
scaffold6533	Augustus	exon	11801	11922	.	-	.	ID=Dca50942.1.exon3;Parent=Dca50942.1
scaffold6533	Augustus	exon	12019	12142	.	-	.	ID=Dca50942.1.exon4;Parent=Dca50942.1
scaffold6533	Augustus	exon	12269	12321	.	-	.	ID=Dca50942.1.exon5;Parent=Dca50942.1
scaffold6533	Augustus	exon	12880	13033	.	-	.	ID=Dca50942.1.exon6;Parent=Dca50942.1