Dca50949.1
Annotation
- 2-exons
- f-274
- sp|B9N2C6_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_827710#GO:0008270#1F0P0C
- AT4G03510.1 | Symbols: RMA1, ATRMA1 | RING membrane-anchor 1 | chr4:1557905-1558654 REVERSE LENGTH=249
- Repeat List (scaffold6535)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca50949.1 |
11 |
232 |
232 |
52.15 |
222 |
47 |
1e-52
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9N2C6_POPTR |
9 |
263 |
263 |
96.95 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca50949.1 |
33 |
232 |
232 |
37.5 |
200 |
41 |
5e-42
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G03510.1 |
40 |
249 |
249 |
84.33 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold6535 |
PASA |
mRNA |
2503 |
5918 |
. |
- |
. |
ID=Dca50949.1;Parent=Dca50949 |
| scaffold6535 |
PASA |
exon |
2503 |
3396 |
. |
- |
. |
ID=Dca50949.1.exon1;Parent=Dca50949.1 |
| scaffold6535 |
PASA |
exon |
5684 |
5918 |
. |
- |
. |
ID=Dca50949.1.exon2;Parent=Dca50949.1 |
