Carnation DB

Dca5108.1

Annotation

7-exons
f-1
sp|D7THJ7_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0007g00840#GO:0005524#1F0P0C
AT2G39730.1 | Symbols: RCA | rubisco activase | chr2:16570951-16573345 REVERSE LENGTH=474
Repeat List (scaffold1196)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5108.1	4	471	473	79.91	468	81	0
Target_name	Start	End	Length	Cov(%)
sp\|D7THJ7_VITVI	3	472	474	99.15

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5108.1	4	473	473	76.74	470	77	0
Target_name	Start	End	Length	Cov(%)
AT2G39730.1	3	474	474	99.57

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1196	Augustus	mRNA	35342	37795	.	+	.	ID=Dca5108.1;Parent=Dca5108
scaffold1196	Augustus	exon	35342	35389	.	+	.	ID=Dca5108.1.exon1;Parent=Dca5108.1
scaffold1196	Augustus	exon	35867	36183	.	+	.	ID=Dca5108.1.exon2;Parent=Dca5108.1
scaffold1196	Augustus	exon	36282	36381	.	+	.	ID=Dca5108.1.exon3;Parent=Dca5108.1
scaffold1196	Augustus	exon	36462	36547	.	+	.	ID=Dca5108.1.exon4;Parent=Dca5108.1
scaffold1196	Augustus	exon	36644	37116	.	+	.	ID=Dca5108.1.exon5;Parent=Dca5108.1
scaffold1196	Augustus	exon	37209	37490	.	+	.	ID=Dca5108.1.exon6;Parent=Dca5108.1
scaffold1196	Augustus	exon	37680	37795	.	+	.	ID=Dca5108.1.exon7;Parent=Dca5108.1