Dca5125.1
Annotation
- 4-exons
- f-1
- sp|B9HUH9_POPTR#White-brown-complex ABC transporter family#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_228054#GO:0005524;GO:0016887#2F0P0C
- Repeat List (scaffold11968)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5125.1 |
2 |
391 |
397 |
72.29 |
390 |
73 |
4e-169
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9HUH9_POPTR |
581 |
975 |
1067 |
37.01 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5125.1 |
2 |
389 |
397 |
68.26 |
388 |
70 |
5e-159
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G53390.1 |
629 |
1015 |
1109 |
34.89 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold11968 |
Augustus |
mRNA |
17629 |
19491 |
. |
+ |
. |
ID=Dca5125.1;Parent=Dca5125 |
| scaffold11968 |
Augustus |
exon |
17629 |
17870 |
. |
+ |
. |
ID=Dca5125.1.exon1;Parent=Dca5125.1 |
| scaffold11968 |
Augustus |
exon |
18259 |
18738 |
. |
+ |
. |
ID=Dca5125.1.exon2;Parent=Dca5125.1 |
| scaffold11968 |
Augustus |
exon |
18827 |
18975 |
. |
+ |
. |
ID=Dca5125.1.exon3;Parent=Dca5125.1 |
| scaffold11968 |
Augustus |
exon |
19169 |
19491 |
. |
+ |
. |
ID=Dca5125.1.exon4;Parent=Dca5125.1 |
