Dca51294.1
Annotation
- 3-exons
- f-1
- sp|O81506_ARATH#Putative retrotransposon protein#Arabidopsis thaliana (Mouse-ear cress)#Name=T7M24.7#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold662)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca51294.1 |
317 |
451 |
451 |
21.28 |
135 |
72 |
7e-53
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O81506_ARATH |
168 |
302 |
964 |
14 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca51294.1 |
317 |
451 |
451 |
12.63 |
135 |
42 |
3e-26
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
582 |
717 |
1428 |
9.52 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold662 |
Augustus |
mRNA |
84430 |
86456 |
. |
- |
. |
ID=Dca51294.1;Parent=Dca51294 |
| scaffold662 |
Augustus |
exon |
84430 |
84826 |
. |
- |
. |
ID=Dca51294.1.exon1;Parent=Dca51294.1 |
| scaffold662 |
Augustus |
exon |
85415 |
86097 |
. |
- |
. |
ID=Dca51294.1.exon2;Parent=Dca51294.1 |
| scaffold662 |
Augustus |
exon |
86181 |
86456 |
. |
- |
. |
ID=Dca51294.1.exon3;Parent=Dca51294.1 |
