Dca5150.1
Annotation
- 3-exons
- f-1
- sp|A5BLV0_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_033389#GO:0003676;GO:0015074#1F1P0C
- sp|Q6L4J8_SOLDE#Putative polyprotein#Solanum demissum (Wild potato)#Name=PGEC219.6#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold1198)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5150.1 |
1 |
1224 |
1284 |
34.73 |
1224 |
34 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5BLV0_VITVI |
1 |
1273 |
1279 |
99.53 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5150.1 |
760 |
888 |
1284 |
3.66 |
129 |
36 |
6e-16
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G23160.1 |
34 |
160 |
1262 |
10.06 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1198 |
Augustus |
mRNA |
52286 |
56982 |
. |
+ |
. |
ID=Dca5150.1;Parent=Dca5150 |
| scaffold1198 |
Augustus |
exon |
52286 |
53985 |
. |
+ |
. |
ID=Dca5150.1.exon1;Parent=Dca5150.1 |
| scaffold1198 |
Augustus |
exon |
54503 |
55464 |
. |
+ |
. |
ID=Dca5150.1.exon2;Parent=Dca5150.1 |
| scaffold1198 |
Augustus |
exon |
55790 |
56982 |
. |
+ |
. |
ID=Dca5150.1.exon3;Parent=Dca5150.1 |
