Dca51641.1
Annotation
- 2-exons
- f-1
- sp|O81506_ARATH#Putative retrotransposon protein#Arabidopsis thaliana (Mouse-ear cress)#Name=T7M24.7#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold6706)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca51641.1 |
301 |
368 |
376 |
11.17 |
68 |
62 |
2e-17
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O81506_ARATH |
1 |
68 |
964 |
7.05 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca51641.1 |
40 |
174 |
376 |
12.76 |
135 |
35 |
1e-22
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
490 |
627 |
1428 |
9.66 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold6706 |
Augustus |
mRNA |
11928 |
13152 |
. |
- |
. |
ID=Dca51641.1;Parent=Dca51641 |
| scaffold6706 |
Augustus |
exon |
11928 |
12541 |
. |
- |
. |
ID=Dca51641.1.exon1;Parent=Dca51641.1 |
| scaffold6706 |
Augustus |
exon |
12636 |
13152 |
. |
- |
. |
ID=Dca51641.1.exon2;Parent=Dca51641.1 |
