Carnation DB

Dca51699.1

Annotation

5-exons
f-1
sp|D7TV84_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_02s0025g00640#unknown#0F0P0C
Os05t0526400-01 Reticulon family protein.
Repeat List (scaffold672)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca51699.1	1	238	238	71.42	238	72	2e-94
Target_name	Start	End	Length	Cov(%)
sp\|D7TV84_VITVI	16	252	252	94.04

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca51699.1	1	236	238	68.48	236	70	7e-93
Target_name	Start	End	Length	Cov(%)
Os05t0526400-01	15	250	252	93.65

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold672	Augus-PASA	mRNA	122207	124936	.	-	.	ID=Dca51699.1;Parent=Dca51699
scaffold672	Augus-PASA	exon	122207	122376	.	-	.	ID=Dca51699.1.exon1;Parent=Dca51699.1
scaffold672	Augus-PASA	exon	122464	122533	.	-	.	ID=Dca51699.1.exon2;Parent=Dca51699.1
scaffold672	Augus-PASA	exon	122628	122769	.	-	.	ID=Dca51699.1.exon3;Parent=Dca51699.1
scaffold672	Augus-PASA	exon	123104	123284	.	-	.	ID=Dca51699.1.exon4;Parent=Dca51699.1
scaffold672	Augus-PASA	exon	124783	124936	.	-	.	ID=Dca51699.1.exon5;Parent=Dca51699.1