Carnation DB

Dca51887.1

Annotation

12-exons
f-1
sp|F6H2U3_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_04s0008g02200#GO:0005783;GO:0003854;GO:0000166;GO:0006694#2F1P1C
AT2G26260.1 | Symbols: AT3BETAHSD/D2, 3BETAHSD/D2 | 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2 | chr2:11178237-11182872 FORWARD LENGTH=564
Repeat List (scaffold6776)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca51887.1	24	553	553	69.8	530	73	0
Target_name	Start	End	Length	Cov(%)
sp\|F6H2U3_VITVI	1	526	758	69.39

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca51887.1	2	544	553	67.81	543	70	0
Target_name	Start	End	Length	Cov(%)
AT2G26260.1	6	548	564	96.27

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold6776	Augus-PASA	mRNA	2913	15075	.	-	.	ID=Dca51887.1;Parent=Dca51887
scaffold6776	Augus-PASA	exon	2913	3037	.	-	.	ID=Dca51887.1.exon1;Parent=Dca51887.1
scaffold6776	Augus-PASA	exon	4466	4532	.	-	.	ID=Dca51887.1.exon2;Parent=Dca51887.1
scaffold6776	Augus-PASA	exon	5096	5252	.	-	.	ID=Dca51887.1.exon3;Parent=Dca51887.1
scaffold6776	Augus-PASA	exon	6504	6678	.	-	.	ID=Dca51887.1.exon4;Parent=Dca51887.1
scaffold6776	Augus-PASA	exon	8437	8542	.	-	.	ID=Dca51887.1.exon5;Parent=Dca51887.1
scaffold6776	Augus-PASA	exon	9631	9829	.	-	.	ID=Dca51887.1.exon6;Parent=Dca51887.1
scaffold6776	Augus-PASA	exon	10093	10172	.	-	.	ID=Dca51887.1.exon7;Parent=Dca51887.1
scaffold6776	Augustus	exon	10897	11022	.	-	.	ID=Dca51887.1.exon8;Parent=Dca51887.1
scaffold6776	Augustus	exon	12115	12285	.	-	.	ID=Dca51887.1.exon9;Parent=Dca51887.1
scaffold6776	Augustus	exon	13547	13680	.	-	.	ID=Dca51887.1.exon10;Parent=Dca51887.1
scaffold6776	Augustus	exon	13832	13921	.	-	.	ID=Dca51887.1.exon11;Parent=Dca51887.1
scaffold6776	Augustus	exon	14844	15075	.	-	.	ID=Dca51887.1.exon12;Parent=Dca51887.1