Carnation DB

Dca5190.1

Annotation

6-exons
f-1
sp|F6GT98_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_17s0000g05840#unknown#0F0P0C
AT1G18840.1 | Symbols: IQD30 | IQ-domain 30 | chr1:6501068-6503435 REVERSE LENGTH=572
Repeat List (scaffold12)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5190.1	1	121	968	5.26	121	43	1e-12
Target_name	Start	End	Length	Cov(%)
sp\|F6GT98_VITVI	51	164	623	18.29

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5190.1	737	968	968	9.5	232	39	6e-20
Target_name	Start	End	Length	Cov(%)
AT1G18840.1	342	572	572	40.38

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold12	Augustus	mRNA	120884	126199	.	+	.	ID=Dca5190.1;Parent=Dca5190
scaffold12	Augustus	exon	120884	120967	.	+	.	ID=Dca5190.1.exon1;Parent=Dca5190.1
scaffold12	Augustus	exon	121567	122466	.	+	.	ID=Dca5190.1.exon2;Parent=Dca5190.1
scaffold12	Augus-PASA	exon	122680	122880	.	+	.	ID=Dca5190.1.exon3;Parent=Dca5190.1
scaffold12	PASA	exon	123502	123588	.	+	.	ID=Dca5190.1.exon4;Parent=Dca5190.1
scaffold12	Augustus	exon	124252	125848	.	+	.	ID=Dca5190.1.exon5;Parent=Dca5190.1
scaffold12	Augustus	exon	126162	126199	.	+	.	ID=Dca5190.1.exon6;Parent=Dca5190.1