Carnation DB

Dca51930.1

Annotation

5-exons
f-1
sp|A9PCJ7_POPTR#Putative uncharacterized protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#unknown#unknown#0F0P0C
sp|Q6DQ93_MUSAC#BTF3b-like transcription factor#Musa acuminata (Banana) (Musa cavendishii)#unknown#unknown#0F0P0C
Repeat List (scaffold679)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca51930.1	1	161	162	77.77	161	79	2e-68
Target_name	Start	End	Length	Cov(%)
sp\|A9PCJ7_POPTR	1	156	156	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca51930.1	1	152	162	74.07	152	79	5e-65
Target_name	Start	End	Length	Cov(%)
Os03t0109600-01	1	151	176	85.79

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold679	Augus-PASA	mRNA	46509	47763	.	-	.	ID=Dca51930.1;Parent=Dca51930
scaffold679	Augus-PASA	exon	46509	46684	.	-	.	ID=Dca51930.1.exon1;Parent=Dca51930.1
scaffold679	Augus-PASA	exon	46782	46820	.	-	.	ID=Dca51930.1.exon2;Parent=Dca51930.1
scaffold679	Augus-PASA	exon	46932	46988	.	-	.	ID=Dca51930.1.exon3;Parent=Dca51930.1
scaffold679	Augus-PASA	exon	47118	47266	.	-	.	ID=Dca51930.1.exon4;Parent=Dca51930.1
scaffold679	Augustus	exon	47696	47763	.	-	.	ID=Dca51930.1.exon5;Parent=Dca51930.1