Dca52.1
Annotation
- 6-exons
- f-1
- sp|B9IC01_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_663815#GO:0003677#1F0P0C
- AT4G12080.1 | Symbols: AHL1, ATAHL1 | AT-hook motif nuclear-localized protein 1 | chr4:7239466-7241246 FORWARD LENGTH=356
- Repeat List (scaffold1)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca52.1 |
1 |
340 |
342 |
55.26 |
340 |
56 |
1e-91
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9IC01_POPTR |
1 |
324 |
324 |
100 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca52.1 |
10 |
337 |
342 |
45.32 |
328 |
43 |
1e-59
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G12080.1 |
21 |
355 |
356 |
94.1 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1 |
Augus-PASA |
mRNA |
511486 |
514132 |
. |
- |
. |
ID=Dca52.1;Parent=Dca52 |
| scaffold1 |
Augus-PASA |
exon |
511486 |
511495 |
. |
- |
. |
ID=Dca52.1.exon1;Parent=Dca52.1 |
| scaffold1 |
Augus-PASA |
exon |
511599 |
511897 |
. |
- |
. |
ID=Dca52.1.exon2;Parent=Dca52.1 |
| scaffold1 |
Augus-PASA |
exon |
512167 |
512328 |
. |
- |
. |
ID=Dca52.1.exon3;Parent=Dca52.1 |
| scaffold1 |
Augustus |
exon |
512500 |
512631 |
. |
- |
. |
ID=Dca52.1.exon4;Parent=Dca52.1 |
| scaffold1 |
Augustus |
exon |
513094 |
513161 |
. |
- |
. |
ID=Dca52.1.exon5;Parent=Dca52.1 |
| scaffold1 |
Augustus |
exon |
513775 |
514132 |
. |
- |
. |
ID=Dca52.1.exon6;Parent=Dca52.1 |
