Carnation DB

Dca5208.1

Annotation

3-exons
f-1
sp|D7M6U9_ARALL#Predicted protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_662710#GO:0016020;GO:0005215;GO:0006857#1F1P1C
sp|G7JPV0_MEDTR#Peptide transporter PTR1#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_4g107610#GO:0016020;GO:0005215;GO:0006857#1F1P1C
Repeat List (scaffold12)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5208.1	23	584	597	49.07	562	52	8e-172
Target_name	Start	End	Length	Cov(%)
sp\|D7M6U9_ARALL	2	559	561	99.46

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5208.1	23	584	597	47.57	562	51	3e-165
Target_name	Start	End	Length	Cov(%)
AT5G28470.1	2	557	559	99.46

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold12	Augustus	mRNA	242079	244047	.	+	.	ID=Dca5208.1;Parent=Dca5208
scaffold12	Augustus	exon	242079	242226	.	+	.	ID=Dca5208.1.exon1;Parent=Dca5208.1
scaffold12	Augustus	exon	242304	242521	.	+	.	ID=Dca5208.1.exon2;Parent=Dca5208.1
scaffold12	Augustus	exon	242620	244047	.	+	.	ID=Dca5208.1.exon3;Parent=Dca5208.1
scaffold12	Augustus	mRNA	242079	243442	.	+	.	ID=Dca5208.2;Parent=Dca5208
scaffold12	Augustus	exon	242079	242226	.	+	.	ID=Dca5208.2.exon1;Parent=Dca5208.2
scaffold12	Augustus	exon	242304	242521	.	+	.	ID=Dca5208.2.exon2;Parent=Dca5208.2
scaffold12	Augustus	exon	242620	243342	.	+	.	ID=Dca5208.2.exon3;Parent=Dca5208.2
scaffold12	Augustus	exon	243428	243442	.	+	.	ID=Dca5208.2.exon4;Parent=Dca5208.2