Dca52170.1
Annotation
- 3-exons
- f-1
- sp|B9H9F3_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_561816#unknown#0F0P0C
- AT2G25670.1 | Symbols: | BEST Arabidopsis thaliana protein match is: copper ion binding (TAIR:AT4G32610.1); Has 43784 Blast hits to 26928 proteins in 1799 species: Archae - 86; Bacteria - 6347; Metazoa - 15971; Fungi - 5398; Plants - 1931; Viruses - 259; Other Eukaryotes - 13792 (source: NCBI BLink). | chr2:10929062-10930619 REVERSE LENGTH=318
- Repeat List (scaffold684)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca52170.1 |
1 |
316 |
316 |
62.02 |
316 |
60 |
2e-41
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9H9F3_POPTR |
1 |
322 |
322 |
100 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca52170.1 |
1 |
316 |
316 |
57.59 |
316 |
55 |
2e-32
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT2G25670.1 |
1 |
318 |
318 |
100 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold684 |
Augus-PASA |
mRNA |
8569 |
11815 |
. |
- |
. |
ID=Dca52170.1;Parent=Dca52170 |
| scaffold684 |
Augus-PASA |
exon |
8569 |
8969 |
. |
- |
. |
ID=Dca52170.1.exon1;Parent=Dca52170.1 |
| scaffold684 |
Augus-PASA |
exon |
9433 |
9661 |
. |
- |
. |
ID=Dca52170.1.exon2;Parent=Dca52170.1 |
| scaffold684 |
Augus-PASA |
exon |
11495 |
11815 |
. |
- |
. |
ID=Dca52170.1.exon3;Parent=Dca52170.1 |
