Dca52204.1
Annotation
- 3-exons
- f-1
- sp|A5AUE6_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_021034#GO:0005524;GO:0003676;GO:0004674;GO:0005529;GO:0015074;GO:0048544#4F2P0C
- sp|B5U9F7_SOYBN#Gag-protease-integrase-RT-RNaseH polyprotein#Glycine max (Soybean) (Glycine hispida)#unknown#GO:0003676;GO:0008233;GO:0008270;GO:0015074;GO:0006508#3F2P0C
- Repeat List (scaffold6850)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca52204.1 |
53 |
240 |
240 |
52.5 |
188 |
57 |
3e-60
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5AUE6_VITVI |
533 |
749 |
2026 |
10.71 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca52204.1 |
80 |
238 |
240 |
32.08 |
159 |
49 |
1e-42
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
909 |
1067 |
1428 |
11.13 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold6850 |
Augustus |
mRNA |
17618 |
19731 |
. |
+ |
. |
ID=Dca52204.1;Parent=Dca52204 |
| scaffold6850 |
Augustus |
exon |
17618 |
17772 |
. |
+ |
. |
ID=Dca52204.1.exon1;Parent=Dca52204.1 |
| scaffold6850 |
Augustus |
exon |
19061 |
19179 |
. |
+ |
. |
ID=Dca52204.1.exon2;Parent=Dca52204.1 |
| scaffold6850 |
Augustus |
exon |
19283 |
19731 |
. |
+ |
. |
ID=Dca52204.1.exon3;Parent=Dca52204.1 |
