Carnation DB

Dca52232.1

Annotation

6-exons
f-1
sp|E0CU92_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_14s0036g00980#GO:0005634;GO:0006352#0F1P1C
Os09t0431500-02 Similar to transcription initiation factor TFIID subunit 10.
Repeat List (scaffold686)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52232.1	9	139	139	74.1	131	79	1e-58
Target_name	Start	End	Length	Cov(%)
sp\|E0CU92_VITVI	6	136	136	96.32

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52232.1	13	139	139	61.15	127	67	5e-49
Target_name	Start	End	Length	Cov(%)
Os09t0431500-02	25	151	152	83.55

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold686	Augus-PASA	mRNA	16640	18353	.	-	.	ID=Dca52232.1;Parent=Dca52232
scaffold686	Augus-PASA	exon	16640	16720	.	-	.	ID=Dca52232.1.exon1;Parent=Dca52232.1
scaffold686	Augus-PASA	exon	17463	17513	.	-	.	ID=Dca52232.1.exon2;Parent=Dca52232.1
scaffold686	Augus-PASA	exon	17645	17702	.	-	.	ID=Dca52232.1.exon3;Parent=Dca52232.1
scaffold686	Augus-PASA	exon	17928	17990	.	-	.	ID=Dca52232.1.exon4;Parent=Dca52232.1
scaffold686	Augus-PASA	exon	18085	18149	.	-	.	ID=Dca52232.1.exon5;Parent=Dca52232.1
scaffold686	Augus-PASA	exon	18252	18353	.	-	.	ID=Dca52232.1.exon6;Parent=Dca52232.1