Carnation DB

Dca52233.1

Annotation

5-exons
f-1
sp|B9IL78_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_909590#unknown#0F0P0C
sp|B9RNU1_RICCO#Transporter, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0920740#unknown#0F0P0C
Repeat List (scaffold686)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52233.1	21	499	502	63.74	479	67	0
Target_name	Start	End	Length	Cov(%)
sp\|B9IL78_POPTR	17	490	494	95.95

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52233.1	28	502	502	56.17	475	60	3e-173
Target_name	Start	End	Length	Cov(%)
AT5G25050.1	23	498	499	95.39

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold686	Augustus	mRNA	30917	33737	.	-	.	ID=Dca52233.1;Parent=Dca52233
scaffold686	Augustus	exon	30917	31519	.	-	.	ID=Dca52233.1.exon1;Parent=Dca52233.1
scaffold686	Augustus	exon	31643	31813	.	-	.	ID=Dca52233.1.exon2;Parent=Dca52233.1
scaffold686	Augustus	exon	31898	31993	.	-	.	ID=Dca52233.1.exon3;Parent=Dca52233.1
scaffold686	Augustus	exon	32383	32642	.	-	.	ID=Dca52233.1.exon4;Parent=Dca52233.1
scaffold686	Augustus	exon	33359	33737	.	-	.	ID=Dca52233.1.exon5;Parent=Dca52233.1