Carnation DB

Dca5224.1

Annotation

9-exons
f-1
sp|B9T5P7_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_0831760#GO:0051015;GO:0043169;GO:0004553;GO:0030674;GO:0005975#4F1P0C
sp|G7J373_MEDTR#Glucan 1,3-beta-glucosidase#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_3g086750#GO:0043169;GO:0004553;GO:0005975#2F1P0C
Repeat List (scaffold12)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5224.1	3	512	512	72.46	510	73	0
Target_name	Start	End	Length	Cov(%)
sp\|B9T5P7_RICCO	7	515	515	98.83

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5224.1	16	485	512	44.92	470	49	6e-130
Target_name	Start	End	Length	Cov(%)
Os10t0370800-01	17	489	1450	32.62

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold12	Augustus	mRNA	351625	355233	.	+	.	ID=Dca5224.1;Parent=Dca5224
scaffold12	Augustus	exon	351625	351750	.	+	.	ID=Dca5224.1.exon1;Parent=Dca5224.1
scaffold12	Augustus	exon	351847	351966	.	+	.	ID=Dca5224.1.exon2;Parent=Dca5224.1
scaffold12	Augustus	exon	352742	352930	.	+	.	ID=Dca5224.1.exon3;Parent=Dca5224.1
scaffold12	Augustus	exon	353425	353583	.	+	.	ID=Dca5224.1.exon4;Parent=Dca5224.1
scaffold12	Augustus	exon	353688	353857	.	+	.	ID=Dca5224.1.exon5;Parent=Dca5224.1
scaffold12	Augustus	exon	353957	354112	.	+	.	ID=Dca5224.1.exon6;Parent=Dca5224.1
scaffold12	Augustus	exon	354333	354685	.	+	.	ID=Dca5224.1.exon7;Parent=Dca5224.1
scaffold12	Augustus	exon	354813	354992	.	+	.	ID=Dca5224.1.exon8;Parent=Dca5224.1
scaffold12	Augustus	exon	355148	355233	.	+	.	ID=Dca5224.1.exon9;Parent=Dca5224.1