Carnation DB

Dca52257.1

Annotation

5-exons
f-1
sp|G7LIT0_MEDTR#ATP-dependent Clp protease ATP-binding subunit clpA-like protein#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_8g100040#GO:0005524;GO:0003677;GO:0004518;GO:0017111;GO:0008233;GO:0006289;GO:0006508#5F2P0C
Repeat List (scaffold6867)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52257.1	54	149	219	38.35	96	54	4e-33
Target_name	Start	End	Length	Cov(%)
sp\|G7LIT0_MEDTR	349	505	926	16.95

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52257.1	54	149	219	37.44	96	53	2e-32
Target_name	Start	End	Length	Cov(%)
Os12t0230100-01	342	498	920	17.06

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold6867	Augustus	mRNA	6865	8631	.	+	.	ID=Dca52257.1;Parent=Dca52257
scaffold6867	Augustus	exon	6865	6990	.	+	.	ID=Dca52257.1.exon1;Parent=Dca52257.1
scaffold6867	Augustus	exon	7274	7469	.	+	.	ID=Dca52257.1.exon2;Parent=Dca52257.1
scaffold6867	Augustus	exon	7804	7849	.	+	.	ID=Dca52257.1.exon3;Parent=Dca52257.1
scaffold6867	Augustus	exon	8116	8191	.	+	.	ID=Dca52257.1.exon4;Parent=Dca52257.1
scaffold6867	Augustus	exon	8416	8631	.	+	.	ID=Dca52257.1.exon5;Parent=Dca52257.1