Carnation DB

Dca52379.1

Annotation

8-exons
f-1
sp|F6H782_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_16s0098g01820#unknown#0F0P0C
AT3G49250.1 | Symbols: DMS3, IDN1 | defective in meristem silencing 3 | chr3:18258613-18260803 REVERSE LENGTH=420
Repeat List (scaffold69)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52379.1	4	424	429	58.74	421	60	4e-145
Target_name	Start	End	Length	Cov(%)
sp\|F6H782_VITVI	8	427	431	97.44

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52379.1	4	409	429	46.15	406	49	1e-103
Target_name	Start	End	Length	Cov(%)
AT3G49250.1	8	410	420	95.95

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold69	Augustus	mRNA	169534	173325	.	+	.	ID=Dca52379.1;Parent=Dca52379
scaffold69	Augustus	exon	169534	169542	.	+	.	ID=Dca52379.1.exon1;Parent=Dca52379.1
scaffold69	Augustus	exon	169801	169941	.	+	.	ID=Dca52379.1.exon2;Parent=Dca52379.1
scaffold69	Augustus	exon	170294	170408	.	+	.	ID=Dca52379.1.exon3;Parent=Dca52379.1
scaffold69	Augustus	exon	171173	171410	.	+	.	ID=Dca52379.1.exon4;Parent=Dca52379.1
scaffold69	Augus-PASA	exon	171550	171741	.	+	.	ID=Dca52379.1.exon5;Parent=Dca52379.1
scaffold69	Augus-PASA	exon	171818	172138	.	+	.	ID=Dca52379.1.exon6;Parent=Dca52379.1
scaffold69	Augus-PASA	exon	172645	172870	.	+	.	ID=Dca52379.1.exon7;Parent=Dca52379.1
scaffold69	Augus-PASA	exon	173278	173325	.	+	.	ID=Dca52379.1.exon8;Parent=Dca52379.1