Dca52417.1
Annotation
- 3-exons
- f-1
- sp|B9IDE0_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_732716#GO:0004540;GO:0008033#1F1P0C
- Os04t0295100-00 Similar to EMB1687 (EMBRYO DEFECTIVE 1687); ribonuclease P/ ribonuclease.
- Repeat List (scaffold690)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca52417.1 |
1 |
148 |
148 |
56.08 |
148 |
54 |
8e-42
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9IDE0_POPTR |
1 |
154 |
154 |
100 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca52417.1 |
1 |
147 |
148 |
52.7 |
147 |
49 |
2e-38
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0295100-00 |
1 |
161 |
163 |
98.77 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold690 |
Augus-PASA |
mRNA |
98446 |
99074 |
. |
+ |
. |
ID=Dca52417.1;Parent=Dca52417 |
| scaffold690 |
Augus-PASA |
exon |
98446 |
98611 |
. |
+ |
. |
ID=Dca52417.1.exon1;Parent=Dca52417.1 |
| scaffold690 |
Augus-PASA |
exon |
98711 |
98848 |
. |
+ |
. |
ID=Dca52417.1.exon2;Parent=Dca52417.1 |
| scaffold690 |
Augus-PASA |
exon |
98932 |
99074 |
. |
+ |
. |
ID=Dca52417.1.exon3;Parent=Dca52417.1 |
