Carnation DB

Dca5245.1

Annotation

5-exons
f-1
sp|Q9LXC2_ARATH#At5g09570#Arabidopsis thaliana (Mouse-ear cress)#Name=F17I14_240#unknown#0F0P0C
Repeat List (scaffold12)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5245.1	1	138	142	64.08	138	66	1e-45
Target_name	Start	End	Length	Cov(%)
sp\|Q9LXC2_ARATH	1	134	139	96.4

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5245.1	1	138	142	64.08	138	66	9e-47
Target_name	Start	End	Length	Cov(%)
AT5G09570.1	1	134	139	96.4

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold12	Augus-PASA	mRNA	523642	525687	.	-	.	ID=Dca5245.1;Parent=Dca5245
scaffold12	Augus-PASA	exon	523642	523737	.	-	.	ID=Dca5245.1.exon1;Parent=Dca5245.1
scaffold12	Augus-PASA	exon	524152	524321	.	-	.	ID=Dca5245.1.exon2;Parent=Dca5245.1
scaffold12	Augus-PASA	exon	524442	524525	.	-	.	ID=Dca5245.1.exon3;Parent=Dca5245.1
scaffold12	Augus-PASA	exon	524824	524883	.	-	.	ID=Dca5245.1.exon4;Parent=Dca5245.1
scaffold12	Augus-PASA	exon	525669	525687	.	-	.	ID=Dca5245.1.exon5;Parent=Dca5245.1