Dca52472.1
Annotation
- 4-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Os08t0202300-03 Reverse transcriptase domain containing protein.
- Repeat List (scaffold6915)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca52472.1 |
16 |
541 |
997 |
26.37 |
526 |
44 |
6e-114
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
220 |
777 |
1717 |
32.49 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca52472.1 |
574 |
989 |
997 |
15.54 |
416 |
38 |
4e-70
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
606 |
993 |
1539 |
25.21 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold6915 |
Augustus |
mRNA |
5709 |
9084 |
. |
+ |
. |
ID=Dca52472.1;Parent=Dca52472 |
| scaffold6915 |
Augustus |
exon |
5709 |
5965 |
. |
+ |
. |
ID=Dca52472.1.exon1;Parent=Dca52472.1 |
| scaffold6915 |
Augustus |
exon |
6068 |
6968 |
. |
+ |
. |
ID=Dca52472.1.exon2;Parent=Dca52472.1 |
| scaffold6915 |
Augustus |
exon |
7048 |
7572 |
. |
+ |
. |
ID=Dca52472.1.exon3;Parent=Dca52472.1 |
| scaffold6915 |
Augustus |
exon |
7774 |
9084 |
. |
+ |
. |
ID=Dca52472.1.exon4;Parent=Dca52472.1 |
