Carnation DB

Dca5249.1

Annotation

5-exons
f-1
sp|G8CUP5_CATRO#Cr2141#Catharanthus roseus (Madagascar periwinkle) (Vinca rosea)#unknown#GO:0000166;GO:0016491;GO:0008270#3F0P0C
Repeat List (scaffold12)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5249.1	10	363	365	61.91	354	64	1e-134
Target_name	Start	End	Length	Cov(%)
sp\|G8CUP5_CATRO	7	358	361	97.5

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5249.1	10	363	365	59.17	354	62	2e-124
Target_name	Start	End	Length	Cov(%)
AT4G37970.1	7	358	363	96.96

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold12	Augustus	mRNA	553834	556335	.	-	.	ID=Dca5249.1;Parent=Dca5249
scaffold12	Augustus	exon	553834	554033	.	-	.	ID=Dca5249.1.exon1;Parent=Dca5249.1
scaffold12	Augustus	exon	554574	554727	.	-	.	ID=Dca5249.1.exon2;Parent=Dca5249.1
scaffold12	Augustus	exon	555201	555720	.	-	.	ID=Dca5249.1.exon3;Parent=Dca5249.1
scaffold12	Augustus	exon	555874	555987	.	-	.	ID=Dca5249.1.exon4;Parent=Dca5249.1
scaffold12	Augustus	exon	556226	556335	.	-	.	ID=Dca5249.1.exon5;Parent=Dca5249.1