Carnation DB

Dca525.1

Annotation

8-exons
f-1
sp|B9IAV9_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_824372#unknown#0F0P0C
Repeat List (scaffold101)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca525.1	13	286	294	49.31	274	52	2e-61
Target_name	Start	End	Length	Cov(%)
sp\|B9IAV9_POPTR	14	286	307	88.92

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca525.1	38	286	294	41.15	249	49	2e-53
Target_name	Start	End	Length	Cov(%)
Os11t0266000-01	61	289	311	73.63

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold101	Augustus	mRNA	109285	111328	.	-	.	ID=Dca525.1;Parent=Dca525
scaffold101	Augustus	exon	109285	109308	.	-	.	ID=Dca525.1.exon1;Parent=Dca525.1
scaffold101	Augustus	exon	109483	109584	.	-	.	ID=Dca525.1.exon2;Parent=Dca525.1
scaffold101	Augustus	exon	109760	109839	.	-	.	ID=Dca525.1.exon3;Parent=Dca525.1
scaffold101	Augustus	exon	110249	110309	.	-	.	ID=Dca525.1.exon4;Parent=Dca525.1
scaffold101	Augustus	exon	110387	110406	.	-	.	ID=Dca525.1.exon5;Parent=Dca525.1
scaffold101	Augustus	exon	110536	110617	.	-	.	ID=Dca525.1.exon6;Parent=Dca525.1
scaffold101	Augustus	exon	110729	110830	.	-	.	ID=Dca525.1.exon7;Parent=Dca525.1
scaffold101	Augustus	exon	110915	111328	.	-	.	ID=Dca525.1.exon8;Parent=Dca525.1