Carnation DB

Dca52629.1

Annotation

7-exons
f-1
sp|B9STT4_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_0623830#unknown#0F0P0C
AT4G30620.1 | Symbols: | Uncharacterised BCR, YbaB family COG0718 | chr4:14948724-14950035 REVERSE LENGTH=180
Repeat List (scaffold6962)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52629.1	3	194	194	69.07	192	70	7e-72
Target_name	Start	End	Length	Cov(%)
sp\|B9STT4_RICCO	2	195	195	99.48

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52629.1	1	194	194	67.52	194	68	4e-67
Target_name	Start	End	Length	Cov(%)
AT4G30620.1	1	180	180	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold6962	Augus-PASA	mRNA	5250	8947	.	-	.	ID=Dca52629.1;Parent=Dca52629
scaffold6962	Augus-PASA	exon	5250	5324	.	-	.	ID=Dca52629.1.exon1;Parent=Dca52629.1
scaffold6962	Augus-PASA	exon	5416	5472	.	-	.	ID=Dca52629.1.exon2;Parent=Dca52629.1
scaffold6962	Augus-PASA	exon	5556	5627	.	-	.	ID=Dca52629.1.exon3;Parent=Dca52629.1
scaffold6962	Augus-PASA	exon	5851	5890	.	-	.	ID=Dca52629.1.exon4;Parent=Dca52629.1
scaffold6962	Augus-PASA	exon	5992	6092	.	-	.	ID=Dca52629.1.exon5;Parent=Dca52629.1
scaffold6962	Augus-PASA	exon	7007	7155	.	-	.	ID=Dca52629.1.exon6;Parent=Dca52629.1
scaffold6962	Augus-PASA	exon	8857	8947	.	-	.	ID=Dca52629.1.exon7;Parent=Dca52629.1