Carnation DB

Dca52687.1

Annotation

7-exons
f-1
sp|D7T4S5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_13s0067g00280#GO:0016020;GO:0005484;GO:0006886;GO:0016192#1F2P1C
sp|B9SLK9_RICCO#Syntaxin, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0592560#GO:0016020;GO:0005484;GO:0006886;GO:0016192#1F2P1C
Repeat List (scaffold698)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52687.1	1	298	342	57.89	298	65	2e-105
Target_name	Start	End	Length	Cov(%)
sp\|D7T4S5_VITVI	55	356	395	76.45

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52687.1	8	298	342	49.12	291	57	6e-81
Target_name	Start	End	Length	Cov(%)
AT5G05760.1	3	297	336	87.79

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold698	Augustus	mRNA	31719	35022	.	-	.	ID=Dca52687.1;Parent=Dca52687
scaffold698	Augustus	exon	31719	31852	.	-	.	ID=Dca52687.1.exon1;Parent=Dca52687.1
scaffold698	Augustus	exon	32539	32579	.	-	.	ID=Dca52687.1.exon2;Parent=Dca52687.1
scaffold698	Augus-PASA	exon	32783	32980	.	-	.	ID=Dca52687.1.exon3;Parent=Dca52687.1
scaffold698	Augus-PASA	exon	33432	33470	.	-	.	ID=Dca52687.1.exon4;Parent=Dca52687.1
scaffold698	Augus-PASA	exon	33585	33718	.	-	.	ID=Dca52687.1.exon5;Parent=Dca52687.1
scaffold698	Augus-PASA	exon	33797	34044	.	-	.	ID=Dca52687.1.exon6;Parent=Dca52687.1
scaffold698	Augus-PASA	exon	34788	35022	.	-	.	ID=Dca52687.1.exon7;Parent=Dca52687.1