Carnation DB

Dca52688.1

Annotation

5-exons
f-1
sp|F6HC03_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_13s0067g00270#GO:0005840;GO:0003735;GO:0042254;GO:0006414#1F2P1C
sp|Q9M5M5_EUPES#60S acidic ribosomal protein PO#Euphorbia esula (Leafy spurge)#unknown#GO:0005840;GO:0003735;GO:0042254;GO:0006414#1F2P1C
Repeat List (scaffold698)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52688.1	1	321	321	82.86	321	83	5e-146
Target_name	Start	End	Length	Cov(%)
sp\|F6HC03_VITVI	1	320	320	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52688.1	1	320	321	77.88	320	79	4e-140
Target_name	Start	End	Length	Cov(%)
AT2G40010.1	1	316	317	99.68

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold698	Augus-PASA	mRNA	36725	39137	.	+	.	ID=Dca52688.1;Parent=Dca52688
scaffold698	Augus-PASA	exon	36725	36982	.	+	.	ID=Dca52688.1.exon1;Parent=Dca52688.1
scaffold698	Augus-PASA	exon	37773	37841	.	+	.	ID=Dca52688.1.exon2;Parent=Dca52688.1
scaffold698	Augus-PASA	exon	38316	38414	.	+	.	ID=Dca52688.1.exon3;Parent=Dca52688.1
scaffold698	Augus-PASA	exon	38503	38895	.	+	.	ID=Dca52688.1.exon4;Parent=Dca52688.1
scaffold698	Augus-PASA	exon	38991	39137	.	+	.	ID=Dca52688.1.exon5;Parent=Dca52688.1