Carnation DB

Dca52693.1

Annotation

7-exons
f-1
sp|B9HT21_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_567325#unknown#0F0P0C
AT1G51740.1 | Symbols: SYP81, ATUFE1, ATSYP81, UFE1 | syntaxin of plants 81 | chr1:19189063-19191188 FORWARD LENGTH=310
Repeat List (scaffold698)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52693.1	1	309	309	74.43	309	74	2e-125
Target_name	Start	End	Length	Cov(%)
sp\|B9HT21_POPTR	1	311	311	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52693.1	1	309	309	68.93	309	69	5e-110
Target_name	Start	End	Length	Cov(%)
AT1G51740.1	1	310	310	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold698	Augus-PASA	mRNA	78102	80488	.	-	.	ID=Dca52693.1;Parent=Dca52693
scaffold698	Augus-PASA	exon	78102	78245	.	-	.	ID=Dca52693.1.exon1;Parent=Dca52693.1
scaffold698	Augus-PASA	exon	78472	78603	.	-	.	ID=Dca52693.1.exon2;Parent=Dca52693.1
scaffold698	Augus-PASA	exon	78696	78938	.	-	.	ID=Dca52693.1.exon3;Parent=Dca52693.1
scaffold698	Augus-PASA	exon	79302	79445	.	-	.	ID=Dca52693.1.exon4;Parent=Dca52693.1
scaffold698	Augus-PASA	exon	79549	79653	.	-	.	ID=Dca52693.1.exon5;Parent=Dca52693.1
scaffold698	Augus-PASA	exon	79737	79820	.	-	.	ID=Dca52693.1.exon6;Parent=Dca52693.1
scaffold698	Augus-PASA	exon	80411	80488	.	-	.	ID=Dca52693.1.exon7;Parent=Dca52693.1