Carnation DB

Dca52728.1

Annotation

6-exons
f-1
sp|B9R811_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_1595950#unknown#0F0P0C
AT1G19715.3 | Symbols: | Mannose-binding lectin superfamily protein | chr1:6816934-6819432 REVERSE LENGTH=601
Repeat List (scaffold699)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52728.1	10	560	561	50.8	551	51	1e-156
Target_name	Start	End	Length	Cov(%)
sp\|B9R811_RICCO	15	539	540	97.22

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52728.1	6	542	561	46.52	537	45	2e-115
Target_name	Start	End	Length	Cov(%)
AT1G19715.3	10	590	601	96.67

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold699	Augus-PASA	mRNA	113611	116082	.	-	.	ID=Dca52728.1;Parent=Dca52728
scaffold699	Augus-PASA	exon	113611	113934	.	-	.	ID=Dca52728.1.exon1;Parent=Dca52728.1
scaffold699	Augus-PASA	exon	114138	114428	.	-	.	ID=Dca52728.1.exon2;Parent=Dca52728.1
scaffold699	Augus-PASA	exon	114503	114814	.	-	.	ID=Dca52728.1.exon3;Parent=Dca52728.1
scaffold699	Augus-PASA	exon	114899	115162	.	-	.	ID=Dca52728.1.exon4;Parent=Dca52728.1
scaffold699	Augus-PASA	exon	115509	115787	.	-	.	ID=Dca52728.1.exon5;Parent=Dca52728.1
scaffold699	Augus-PASA	exon	115867	116082	.	-	.	ID=Dca52728.1.exon6;Parent=Dca52728.1