Carnation DB

Dca529.1

Annotation

6-exons
f-1
sp|A9PH51_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_814402#GO:0016881;GO:0005524#2F0P0C
AT1G63800.1 | Symbols: UBC5 | ubiquitin-conjugating enzyme 5 | chr1:23667888-23669003 REVERSE LENGTH=185
Repeat List (scaffold101)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca529.1	62	248	249	41.76	187	56	3e-56
Target_name	Start	End	Length	Cov(%)
sp\|A9PH51_POPTR	1	185	186	99.46

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca529.1	62	248	249	40.16	187	54	5e-52
Target_name	Start	End	Length	Cov(%)
AT1G63800.1	1	184	185	99.45

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold101	Augustus	mRNA	131411	132671	.	-	.	ID=Dca529.1;Parent=Dca529
scaffold101	Augustus	exon	131411	131556	.	-	.	ID=Dca529.1.exon1;Parent=Dca529.1
scaffold101	Augustus	exon	131694	131822	.	-	.	ID=Dca529.1.exon2;Parent=Dca529.1
scaffold101	Augustus	exon	131910	131962	.	-	.	ID=Dca529.1.exon3;Parent=Dca529.1
scaffold101	Augustus	exon	132050	132164	.	-	.	ID=Dca529.1.exon4;Parent=Dca529.1
scaffold101	Augustus	exon	132252	132331	.	-	.	ID=Dca529.1.exon5;Parent=Dca529.1
scaffold101	Augustus	exon	132445	132671	.	-	.	ID=Dca529.1.exon6;Parent=Dca529.1